Siqian Shen (IOE) to receive an Early Career Award from the Department of Energy

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siqian-shen-featuredMICDE Associate Director Siqian Shen has been selected to receive an Early Career Award for the Department of Energy Office of Science by the DoE Office of Advanced Scientific Computing Research. The objective of her proposal titled “Extreme‐Scale Stochastic Optimization and Simulation via Learning‐Enhanced Decomposition and Parallelization” is to develop an efficient and unified framework that integrates machine learning with discrete optimization and risk‐averse modeling. The models considered represent a broad class of complex decision‐making problems, where 0‐1 or continuous decisions are made before and/or after knowing multiple and potentially correlated sources of uncertainties. This research will shed new light on the traditional decomposition algorithms for high‐performance computing.

Prof. Shen was recently promoted to Associate Professor of Industrial and Operations Engineering. To learn more about her research please visit http://micde.umich.edu/faculty-member/siqian-shen/.

The Early Career Award program from the US Department of Energy is a funding opportunity for researchers in universities and DOE national laboratories to support the development of individual research programs of outstanding scientists early in their careers. For the past 8 years this program has helped stimulate research careers in the disciplines supported by the DOE Office of Science. These include Advanced Scientific Computing Research (ASCR); Biological and Environmental Research (BER); Basic Energy Sciences (BES), Fusion Energy Sciences (FES); High Energy Physics (HEP), and Nuclear Physics (NP).

U-M, SJTU research teams share $1 million for data science projects

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Five research teams from the University of Michigan and Shanghai Jiao Tong University in China are sharing $1 million to study data science and its impact on air quality, galaxy clusters, lightweight metals, financial trading and renewable energy.

Since 2009, the two universities have collaborated on a number of research projects that address challenges and opportunities in energy, biomedicine, nanotechnology and data science.

In the latest round of annual grants, the winning projects focus on data science and how it can be applied to chemistry and physics of the universe, as well as finance and economics.

For more, read the University Record article.

For descriptions of the research projects, see the MIDAS/SJTU partnership page.

SAVE THE DATE: MIDAS Annual Symposium, Oct. 11

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Please join us for the 2017 Michigan Institute for Data Science Symposium.

The keynote speaker will be Cathy O’Neil, mathematician and best-selling author of “Weapons of Math Destruction: How Big Data Increases Inequality and Threatens Democracy.”

Other speakers include:

  • Nadya Bliss, Director of the Global Security Initiative, Arizona State University
  • Francesca Dominici, Co-Director of the Data Science Initiative and Professor of Biostatistics, Harvard T.H. Chan School of Public Health
  • Daniela Whitten, Associate Professor of Statistics and Biostatistics, University of Washington
  • James Pennebaker, Professor of Psychology, University of Texas

More details, including how to register, will be available soon.

New Data Science Computing Platform Available to U-M Researchers

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Advanced Research Computing – Technology Services (ARC-TS) is pleased to announce an expanded data science computing platform, giving all U-M researchers new capabilities to host structured and unstructured databases, and to ingest, store, query and analyze large datasets.

The new platform features a flexible, robust and scalable database environment, and a set of data pipeline tools that can ingest and process large amounts of data from sensors, mobile devices and wearables, and other sources of streaming data. The platform leverages the advanced virtualization capabilities of ARC-TS’s Yottabyte Research Cloud (YBRC) infrastructure, and is supported by U-M’s Data Science Initiative launched in 2015. YBRC was created through a partnership between Yottabyte and ARC-TS announced last fall.

The following functionalities are immediately available:

  • Structured databases:  MySQL/MariaDB, and PostgreSQL.
  • Unstructured databases: Cassandra, MongoDB, InfluxDB, Grafana, and ElasticSearch.
  • Data ingestion: Redis, Kafka, RabbitMQ.
  • Data processing: Apache Flink, Apache Storm, Node.js and Apache NiFi.

Other types of databases can be created upon request.

These tools are offered to all researchers at the University of Michigan free of charge, provided that certain usage restrictions are not exceeded. Large-scale users who outgrow the no-cost allotment may purchase additional YBRC resources. All interested parties should contact hpc-support@umich.edu.

At this time, the YBRC platform only accepts unrestricted data. The platform is expected to accommodate restricted data within the next few months.

ARC-TS also operates a separate data science computing cluster available for researchers using the latest Hadoop components. This cluster also will be expanded in the near future.

XSEDE Research Allocation Requests due July 15th

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XSEDE Allocations award eligible users access to compute, visualization, and/or storage resources as well as extended support services.

XSEDE has various types of allocations from short term exploratory request to year long projects. In order to access to XSEDE resources you must have an allocation. Submit your allocation requests via the XSEDE Resource Allocation System (XRAS) in the XSEDE User Portal.

ARC-TS consultants can help researchers navigate the XSEDE resources and process. Contact them at hpc-support@umich.edu

Big Data in Transportation and Mobility symposium highlights diverse, emerging issues

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MBDH-transThe Big Data in Transportation and Mobility symposium held June 22-23, 2017, in Ann Arbor, MI brought together more than 150 data science practitioners from academia, industry and government to explore emerging issues in this expanding field.

Sponsored by the NSF-supported Midwest Big Data Hub (MBDH) and the Michigan Institute for Data Science (MIDAS), the symposium featured lightning talks from transportation research programs around the Midwest; tutorials and breakout sessions on specific issues and methods; a poster session; and a keynote address from two representatives of the Smart Columbus project: Chris Stewart, Ohio State University Associate Professor of Computer Science and Engineering, and Shoreh Elhami, GIS Manager for the city of Columbus.

Speakers and attendees came from a number of organizations from across the midwest including the University of Michigan, University of Illinois, University of Nebraska, University of North Dakota, North Dakota State University, Ohio State University, Purdue University, Denso International America, Fiat Chrysler, Ford Motor Company, General Motors, IAV Automotive Engineering and Yottabyte.  

“This was an extremely valuable opportunity to share information and ideas,” said Carol Flannagan, one of the organizers of the symposium and a researcher at MIDAS and the U-M Transportation Research Institute. “Cross-discipline and cross-institutional collaboration is crucial to the success of Big Data applications, and we took a significant step forward in that vein during this symposium.”

Topics addressed in talks, breakouts, and tutorials included:

  • New Analytic Tools for Designing and Managing Transportation Systems
  • New Mobility Options for Small and Mid-sized Cities in the Midwest
  • Automated and Connected Vehicles
  • Transforming Transportation Operations using High Performance Computing
  • On-Demand Transit
  • Using Big Data for Monitoring Bridges

At the closing session, participants outlined some areas that could be fruitful to focus on going forward, including increasing data-science literacy in the general public; diversity and workforce development in data science; public data-sharing platforms and partners; and privacy issues.

For a complete list of speakers and topics, please see the agenda. Videos of selected talks will be posted at midas.umich.edu in the coming days.

MICDE announces 2017-2018 Fellowship recipients

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MICDE is pleased to announce the recipients of the 2017-2018 MICDE Fellowships for students enrolled in the PhD in Scientific Computing or the Graduate Certificate in Computational Discovery and Engineering. We had 91 applicants from 25 departments representing 6 schools and colleges. Due to the extraordinary number of high quality applications we increased the number of fellowships from 15 to 20 awards. See our Fellowship page for more information.

AWARDEES

Diksha Dhawan, Chemistry
Negar Farzaneh, Computational Medicine & Bioinformatics
Kritika Iyer, Biomedical Engineering
Tibin John, Neuroscience
Bikash Kanungo, Mechanical Engineering
Yu-Han Kao, Epidemiology
Steven Kiyabu, Mechanical Engineering
Christiana Mavroyiakoumou, Mathematics
Ehsan Mirzakhalili, Mechanical Engineering
Colten Peterson, Climate and Space Sciences & Engineering
James Proctor, Materials Science & Engineering
Evan Rogers, Biomedical Engineering
Longxiu Tian, S. Ross School of Business
Jipu Wang, Nuclear Engineering and Radiological Sciences
Yanming Wang, Chemistry
Zhenlin Wang, Mechanical Engineering
Alicia Welden, Chemistry
Anna White, Industrial & Operations Engineering
Chia-Nan Yeh, Physics
Yiling Zhang, Industrial & Operations Engineering

HONORABLE MENTIONS

Geunyeong Byeon, Industrial & Operations Engineering
Ayoub Gouasmi, Aerospace Engineering
Joseph Kleinhenz, Physics
Jia Li, Physics
Changjiang Liu, Biophysics
Vo Nguyen, Computational Medicine & Bioinformatics
Everardo Olide, Applied Physics
Qiyun Pan, Industrial & Operations Engineering
Pengchuan Wang, Civil & Environmental Engineering
Xinzhu Wei, Ecology & Evolutionary Biology

COMPUTATIONAL SCIENCE AROUND U-M: Increasing women participation in computing education

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5 faculty members recognized for working towards increasing women participation in computing education

Four faculty members of the University of Michigan’s division of Computer Science Engineering (CSE) and one from the department of Naval Architecture and Marine Engineering (NAME) were awarded second place in the NCWIT Extension Services Transformation (NEXT) Awards. NAME lecturer Laura Alford, along CSE faculty members Dr. Mary Lou Dorf, Dr. Valeria Bertacco, Dr. Amir Kamil and Dr. William Arthur were recognized for showing outstanding achievement as clients of NCWIT Extension Services of Undergraduate Programs(ES-UP). ES-UP is”a program that helps academic departments of computing develop high-impact strategies for recruiting and retaining more women students with advice that is customized to local needs and conditions”. More…

ARC-TS seeks input on next generation HPC cluster

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The University of Michigan is beginning the process of building our next generation HPC platform, “Big House.”  Flux, the shared HPC cluster, has reached the end of its useful life. Flux has served us well for more than five years, but as we move forward with replacement, we want to make sure we’re meeting the needs of the research community.

ARC-TS will be holding a series of town halls to take input from faculty and researchers on the next HPC platform to be built by the University.  These town halls are open to anyone and will be held at:

  • College of Engineering, Johnson Room, Tuesday, June 20th, 9:00a – 10:00a
  • NCRC Bldg 300, Room 376, Wednesday, June 21st, 11:00a – 12:00p
  • LSA #2001, Tuesday, June 27th, 10:00a – 11:00a
  • 3114 Med Sci I, Wednesday, June 28th, 2:00p – 3:00p

Your input will help to ensure that U-M is on course for providing HPC, so we hope you will make time to attend one of these sessions. If you cannot attend, please email hpc-support@umich.edu with any input you want to share.

Job Opening: Research Cloud Administrator

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Advanced Research Computing – Technology Services (ARC-TS)  has an exciting opportunity for a Research Cloud Administrator.

This position will be part of a team working on a novel platform for research computing in the university for data science and high performance computing.  The primary responsibilities for this position will be to develop and create a resource sharing environment to enable execution of Data Science and HPC workflows using containers for University of Michigan researchers.

For more details and to apply, visit: http://careers.umich.edu/job_detail/142372/research_cloud_administrator_intermediate