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DTSTART;TZID=America/Detroit:20230316T160000
DTEND;TZID=America/Detroit:20230316T163000
DTSTAMP:20260619T040404
CREATED:20230123T090003Z
LAST-MODIFIED:20230809T182009Z
UID:10000597-1678982400-1678984200@micde.umich.edu
SUMMARY:PhD Seminar: Xingmin Wang
DESCRIPTION:The Ph.D. in Scientific Computing program is intended for students who will make extensive use of large-scale computation\, computational methods\, or algorithms for advanced computer architectures in their doctoral studies. This seminar series showcases the breadth of research covered by the program.  \nFeatured Speaker:\nXingmin Wang\, PhD Candidate\, Civil and Environmental Engineering and Scientific Computing\nXingmin Wang is currently a Ph.D. candidate in the Department of Civil and Environmental Engineering at the University of Michigan\, Ann Arbor\, advised by Professor Henry Liu. He obtained his bachelor’s degree in the school of vehicle and mobility from Tsinghua University\, in 2018. His research interests include traffic state estimation and traffic network optimization with connected and automated vehicles.  \nTraffic signal optimization with connected vehicle trajectories\nTraffic signal retiming is one of the most cost-effective methods for reducing congestion and energy consumption in urban areas based on the existing road infrastructure. However\, high installation and maintenance costs of vehicle detectors have prevented the widespread implementation of adaptive traffic control systems (ATSC). Therefore\, most intersections are still controlled by fixed-time traffic signals which are not updated regularly due to the lack of traffic monitoring capabilities. In the past few years\, vehicle trajectory data has become increasingly available and offers many advantages over detectors and other infrastructure-based sensors for traffic monitoring; but using such data for automatic traffic signal diagnosis and optimization at scalable implementable levels is relatively unexplored. To fill this gap\, this work proposes Optimizing Traffic Signals as a Service (OSaaS)\, an integrated traffic signal re-timing system that uses vehicle trajectories as the main input. OSaaS addresses many of the current challenges relating to signal retiming with trajectory data such as incomplete observation due to limited penetration rates. The system builds a queueing model that reconstructs the overall average traffic state\, calibrated from performance measurements directly obtained from vehicle trajectories. The calibrated queueing model then predicts and evaluates network performance under different traffic signal parameters to provide diagnostics and direct traffic signal retiming guidance. In April 2022\, a citywide field test of OSaaS was conducted in Birmingham\, Michigan\, with 34 signalized intersections. This resulted in decreases in both the delay and number of stops by up to 20% and 30%\, respectively. OSaaS provides a more scalable\, sustainable\, resilient\, and efficient solution to traffic signal retiming without requiring any additional infrastructure through the exclusive utilization of currently available trajectory data. As a result\, it presents the possibility of upgrading all existing fixed-time traffic signals to dynamic systems with periodical parameter updates\, something that is not currently possible without significant investments in infrastructure-based traffic flow sensors. \n\n  \nThis event is part of MICDE’s seminar series featuring Ph.D. students in the Scientific Computing program. This series is open to all. University of Michigan faculty and students interested in computational and data sciences are encouraged to attend. \nQuestions? Email MICDE-events@umich.edu \n 
URL:https://micde.umich.edu/event/phd-seminar-xingmin-wang/
LOCATION:Venue TBA\, MI\, 48109\, United States
CATEGORIES:Featured Events,MICDE PhD Seminar Series,Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2023/02/2023-Winter-Wang-1.png
GEO:42.3053253;-83.6694169
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20230316T163000
DTEND;TZID=America/Detroit:20230316T170000
DTSTAMP:20260619T040404
CREATED:20230123T090003Z
LAST-MODIFIED:20230809T181913Z
UID:10000601-1678984200-1678986000@micde.umich.edu
SUMMARY:PhD Seminar: Xintao Yan
DESCRIPTION:The Ph.D. in Scientific Computing program is intended for students who will make extensive use of large-scale computation\, computational methods\, or algorithms for advanced computer architectures in their doctoral studies. This seminar series showcases the breadth of research covered by the program.  \nFeatured Speaker:\nXintao Yan\, PhD Candidate\, Civil and Environmental Engineering and Scientific Computing\nXintao Yan is currently a Ph.D. candidate in the Department of Civil and Environmental Engineering at the University of Michigan\, Ann Arbor\, advised by Professor Henry Liu. He received his bachelor’s degree from the Department of Automotive Engineering at Tsinghua University\, China in 2018. His research interests are mainly about the safety of connected and automated vehicles\, including naturalistic driving behavior modeling and automated driving system evaluation. \nSimulating Naturalistic Driving Environment for Autonomous Vehicles\nSimulation provides a controllable\, efficient\, and low-cost venue for both developing and testing autonomous vehicles (AV). But for simulation to be an effective tool\, statistical realism of the simulated driving environment is a must. In this talk\, we will introduce methods to simulate naturalistic driving environment for AV testing purposes. \n\n  \nThis event is part of MICDE’s seminar series featuring Ph.D. students in the Scientific Computing program. This series is open to all. University of Michigan faculty and students interested in computational and data sciences are encouraged to attend. \nQuestions? Email MICDE-events@umich.edu \n 
URL:https://micde.umich.edu/event/phd-seminar-xintao-yan/
LOCATION:Venue TBA\, MI\, 48109\, United States
CATEGORIES:Featured Events,MICDE PhD Seminar Series,Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2023/02/2023-Winter-Yan.png
GEO:42.3053253;-83.6694169
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250204T120000
DTEND;TZID=America/Detroit:20250204T130000
DTSTAMP:20260619T040404
CREATED:20250114T145459Z
LAST-MODIFIED:20260522T154253Z
UID:10000791-1738670400-1738674000@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nIf you have any questions\, please email micde-phd@umich.edu. \nRegister to attend \n\nAerodynamic Shape Optimization with Curved Mesh Adaptation\nIn this talk we present a method for performing curved mesh adaptation during aerodynamic shape optimization with high-order computational fluid dynamics (CFD). High-order methods are promising because they offer increased accuracy for a given mesh. Mesh adaptation further improves the efficiency of high-order methods. These high-order methods require curved meshes to properly capture the simulated geometry and a mesh adaptation process that can generate curved meshes. Adapting these curved meshes needs to be robust as any failures will require human intervention inside the automated optimization loop. We first will present HOEP\, a novel and highly robust method for adapting highly-anisotropic curved meshes. Then we will present our adaptation strategy that balances computational cost with accuracy and show results for transonic airfoil optimization. \nAlexander Coppeans\, Aerospace Engineering and Scientific Computing\nAlexander Coppeans is a 5th year PhD Student in Aerospace Engineering and Scientific Computing. His research focuses on high-order adaptive methods for CFD based aerodynamic shape optimization. \nRegister to attend
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-02-04-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/01/2025-02-04-Coppeans.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250211T120000
DTEND;TZID=America/Detroit:20250211T130000
DTSTAMP:20260619T040404
CREATED:20250114T150617Z
LAST-MODIFIED:20260522T152322Z
UID:10000792-1739275200-1739278800@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nIf you have any questions\, please email micde-phd@umich.edu. \nRegister to attend \n\nAdaptive Deep Learning-Powered Multi-fidelity Stratified Sampling for Efficient Failure Analysis of Nonlinear Dynamic Systems\nCurrent stochastic simulation-based frameworks that leverage variance reduction techniques still require a substantial number of model evaluations to estimate small failure probabilities associated with rare events. In the context of high-fidelity modeling environments\, these frameworks can become computationally challenging\, especially when dealing with complex nonlinear systems. Despite the potential of providing remarkable computational efficiency\, low-fidelity models may yield bias if used directly. To address this challenge\, this work introduces a multi-fidelity framework within the setting of stratified sampling\, termed Multi-Fidelity Stratified Sampling (MFSS)\, for efficient estimation of failure probabilities given various limit states of interest. In this approach\, the strata-wise failure probabilities\, associated with a carefully selected stratification variable\, are estimated by multi-fidelity Monte Carlo. To minimize the computational budget\, the high-fidelity data used in the stratified multi-fidelity estimator is also employed as training data for developing a deep learning-based metamodel\, which then serves as a low-fidelity model. To derive the trade-off between the approximation quality and computational demand associated with the metamodel\, an adaptive strategy is proposed to seek the minimal training data that ensures a desired correlation between the high- and low-fidelity models. Through application to a full-scale high-rise steel building subject to stochastic wind excitation\, the proposed scheme is demonstrated to be capable of accurately reproducing exceedance probability curves of nonlinear responses of interest with significant computational gains\, compared to variance reduction techniques relying solely on high-fidelity models. \nLiuyun Xu (Civil Engineering and Scientific Computing)\nLiuyun Xu is a fourth-year Ph.D. candidate in Civil Engineering and Scientific Computing at the University of Michigan. Her research lies in enhancing the resilience and adaptation of civil infrastructures against climate-related hazards by leveraging AI/ML\, scientific computing and data science.  \n\nA Hybrid Surrogate Modeling Framework for Digital Twins of Nuclear Energy Systems\nNuclear Power Plants (NPPs) are complex systems that can benefit from Digital Twin (DT) technologies to reduce operational costs and increase plant reliability. A system surrogate model is developed to predict quantities and responses associated with diverse physical and computational assets. The proposed hybrid surrogate modeling framework is applied to a Pebble-Bed Fluoride-salt-cooled High-temperature Reactor (PB-FHR)\, with a two-loop reactor configuration. The surrogate’s hybrid design combines the accuracy of physical models and computational efficiency of data-driven models to achieve speed and predictive robustness. This surrogate model is adaptable through assimilation with online measurements\, which is highlighted in a proposed DT framework design. \nJasmin Lim (Aerospace Engineering and Scientific Computing)\nJasmin is a 5th PhD student in the department of aerospace engineering in the Computational Aerosciences Laboratory under the advisement of Karthik Duraisamy. Her research is focused on developing data-driven methods for digital twin applications; which includes surrogate modeling\, data assimilation\, and system framework design.  \n\nRegister to attend
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-2-11-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/01/2025-02-11-Xu-Lim.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250225T120000
DTEND;TZID=America/Detroit:20250225T130000
DTSTAMP:20260619T040404
CREATED:20250114T142545Z
LAST-MODIFIED:20250221T144301Z
UID:10000793-1740484800-1740488400@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:  \nThe MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. If you have any questions\, please email micde-phd@umich.edu. \nRegister to attend\n  \n\nNumerical simulation of the collapse of a cavitation bubble near a deformable solid surface\nThe exact mechanisms leading to the permanent deformation of solid surfaces\, following a cavitation event\, are still unclear. Specifically\, the relationship between the characteristics of a given cavitation bubble and the shape of the resulting pit is unknown. In this study\, we numerically investigate the collapse of a single cavitation bubble near a solid surface\, with the objective of characterizing how the pit shape (height and depth) changes with the bubble initial radius\, its distance from the solid and the initial pressure difference at the bubble interface. To this end\, we implement a diffuse interface method for the interaction of multiple compressible fluids and hyperelastic solids in an Eulerian frame of reference. This method numerically solves the evolution equations of mass\, momentum\, energy as well as volume fractions of each material and of the mixture. The model is closed by splitting the internal energy of each material into hydrodynamic and elastic contributions\, with appropriate equations of state. A set of evolution equations of local cobasis\, with a plastic source term\, are used to compute the elastic Finger tensor\, which is needed to obtain the elastic energy and the deviatoric stress. We additionally provide improvements to the numerical method to preserve interface conditions. The proposed method allows to elucidate some of the mechanisms of cavitation pitting.  \nBaudouin Fonkwa Kamga\, Mechanical Engineering and Scientific Computing\nBaudouin is a 4th year PhD student in the department of Mechanical Engineering\, under the supervision of Eric Johnsen. His research combines the theoretical study of cavitation in viscoelastic medium and the development of numerical methods for multimaterial compressible flows. \n\nScalable foundation model training for computational pathology\nScalable and efficient foundation model training is critical for advancing computational pathology. In this talk\, we present a two-stage self-supervised pipeline for whole slide image (WSI) analysis. First\, HiDisc leverages the inherent patient–slide–patch hierarchy to learn robust visual representations efficiently without relying on heavy data augmentation\, outperforming existing methods in cancer diagnosis and genetic mutation prediction. Building on these high-quality patch-level features\, our second stage\, Slide Pre-trained Transformers (SPT)\, treats WSI patches as tokens and integrates data transformation strategies from both language and vision models to capture the rich morphological diversity of gigapixel images. Together\, these methods offer a scalable\, efficient framework for training foundation models that drive robust performance across a range of diagnostic tasks. \nXinhai Hou\, Bioinformatics and Scientific Computing\nXinhai Hou is a PhD candidate in the department of computational medicine and bioinformatics. His research focuses on self-supervised learning\, computer vision\, and multimodal machine learning\, with a particular emphasis on real-world applications such as AI in healthcare and medicine.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-2-25-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/01/2025-02-25-Fonkwa-Kamga-Hou-1.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250311T120000
DTEND;TZID=America/Detroit:20250311T130000
DTSTAMP:20260619T040404
CREATED:20250225T214118Z
LAST-MODIFIED:20250225T214448Z
UID:10000810-1741694400-1741698000@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:  \nThe MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. If you have any questions\, please email micde-phd@umich.edu. \nRegister to attend\n  \n\nUnraveling Rotator Cuff Tendon Tear Growth Mechanisms with Full-Volume Strains and Data-Driven Modeling\nIn this talk\, I will show how full-volume methods\, which can probe internal locations of a material\, enable the detection of regions with high shear strain concentration in intact and torn rotator cuff tendons. I will also explain my approach to use these full-volume datasets to develop a finite element model of this tendon using variational system identification\, and future work to obtain validated computational models that can predict tear growth. \nNathaly Villacis\, Mechanical Engineering and Scientific Computing\nNathaly is a fifth year Ph.D. candidate in Mechanical Engineering\, who works at the Soft Tissue Mechanics Lab\, supervised by Dr. Ellen Arruda. Her research involves the characterization of rotator cuff tendon tear growth with experimental and computational methods. She will work on machine learning models of the rotator cuff once she finishes her Ph.D. \n\nIncremental Tensor Decompositions for Machine Learning and Bayesian Inference\nWith recent advancements in large-scale parallel computing\, there is an increased interest in constructing high-fidelity digital twins of complex systems. Especially for systems that have limited physical experimentation possibilities\, high-fidelity simulations may provide the main source of information for constructing digital twins. However\, performing such simulations is computationally intensive and generates extreme amounts of data. The size of the generated simulation data makes it challenging to use the data in further analysis. As the spatial and temporal resolution of these simulations grow\, even storing the data may become a serious bottleneck. This talk proposes a solution to this multi-faceted problem through the use of low-rank tensor decompositions. Specifically\, we present incremental algorithms that provide computationally efficient ways of compressing data with accuracy guarantees. We showcase a diverse array of applications\, from 3D turbulent Navier-Stokes simulations to Minecraft gameplay videos\, demonstrating the versatility and power of these techniques. \nDoruk Aksoy\, Aerospace Engineering and Scientific Computing\nDoruk is a 5th year Ph.D. candidate in the Department of Aerospace Engineering in the Computational Autonomy group. His research focuses on developing incremental low-rank tensor decomposition algorithms to compress large-scale data for downstream machine learning applications.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-20250311/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/02/2025-03-11-Villacis-Aksoy.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250318T120000
DTEND;TZID=America/Detroit:20250318T130000
DTSTAMP:20260619T040404
CREATED:20250114T142206Z
LAST-MODIFIED:20250228T184043Z
UID:10000794-1742299200-1742302800@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. If you have any questions\, please email micde-phd@umich.edu. \nRegister to attend\n  \n  \n\nSolving High Reynolds Number Flows on Cartesian Cut-cell Meshes using a Jacobian-Free Newton–Krylov Method\nIn this work\, we developed a Newton–Krylov method for a second-order Cartesian cut cell Reynolds-averaged Navier–Stokes (RANS) solver\, Viscous Aerodynamic Cartesian Cut cells (VACC)\, with the one equation Spalart–Allmaras (SA) turbulence model. The Newton–Krylov method uses pseudo-transient continuation and a point Jacobi preconditioner to accelerate convergence. Then various wall functions were compared on a finite flat plate and 2D bump cases. The SA analytical wall function was used as a baseline. An ordinary differential equation (ODE) wall function and wall-modeled RANS (WMRANS) approach were also implemented. Although these methods all showed promise\, the interior viscous fluxes resulted in oscillatory pressures. These oscillations degraded the accuracy of all of the solutions. \nAlex Kleb\, Aerospace Engineering\nAlex Kleb is a fifth year PhD candidate in the CFD Group and MDO lab in the Aerospace Engineering department. \n\nGeometrically Nonlinear Methods for High-Fidelity MDO of Very-Flexible Aircraft\nOver the past decade\, advances in Multidisciplinary Design Optimization (MDO) have enabled the optimization of aircraft wings using high-fidelity simulations of their coupled aerodynamic and structural behavior. Using RANS CFD and detailed structural finite element wingbox models\, the aerodynamic shape and internal structural sizing of a wing can be optimized concurrently to tailor the wing’s aeroelastic behavior and optimally trade-off drag and structural mass. This capability makes MDO a key enabling technology for the next generation of efficient high-aspect-ratio transport aircraft. However\, as their aspect-ratios increase\, these wings increasingly exhibit geometrically nonlinear behavior that cannot be correctly modeled by typical linear structural analysis methods. This work demonstrates the first simultaneous optimization of a wing’s aerodynamic shape and structural sizing using high-fidelity geometrically nonlinear models. Our methods are implemented in the open-source finite element library\, TACS\, and include a geometrically nonlinear shell element formulation\, an efficient and robust nonlinear solver\, and a constitutive model for stiffened shells. We demonstrate the ability to couple these nonlinear structural analysis tools to a high-fidelity RANS CFD solver using a geometrically nonlinear load and displacement transfer scheme. Finally\, we use this capability to optimize a single-aisle commercial transport aircraft wing featuring 547 design variables and 1277 constraints. \nAlasdair Christison Gray\, Aerospace Engineering\nAlasdair Christison Gray is a 5th year PhD student in the Aerospace Engineering department’s MDO Lab. His research focuses on applying high performance computing to the large scale design optimization of aircraft wings.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-3-18-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/01/2025-03-18-Kleb-Christison-Gray.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250401T120000
DTEND;TZID=America/Detroit:20250401T130000
DTSTAMP:20260619T040404
CREATED:20250114T141907Z
LAST-MODIFIED:20260522T154208Z
UID:10000795-1743508800-1743512400@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nRegister to attend\n\nMonitoring the fidelity of the LIGO detectors\nThe detection of gravitational waves depends on LIGO’s ability to discriminate authentic signals from instrumental noise. To improve this capability\, the LIGO Scientific Collaboration employs hardware injections\, controlled\, simulated signals introduced directly into the detectors. These injections validate the analysis pipelines and refine the calibration of the detector. This study focuses on continuous- wave signals from the initial phase of the fourth observing run (O4a)\, using simulated emissions from rapidly rotating neutron stars as benchmarks to assess sensitivity and data-processing efficiency. The analysis employs a template generation approach that uses complex conjugates to align observational data with theoretical signal templates and offers probabilistic validation of detected signals. An investigation explores the role of hardware injections in the refinement of software models and the maintenance of the timing and amplitude. By utilizing daily diagnostic plots for a diverse array of synthetic neutron star signals\, including both binary and isolated systems\, the detector’s responsiveness is evaluated over a broad frequency spectrum. The results emphasize the importance of hardware injections in sustaining calibration standards and affirming LIGO’s reliability in gravitational wave detection \nPreet Baxi\, Physics and Scientific Computing\nPreet Baxi is an innovative Data Scientist and Algorithm Developer with experience in scientific computing\, data pipeline optimization\, and business data analysis. Specializing in developing advanced algorithms and has worked extensively in gravitational wave data analysis\, contributing to cutting-edge research in astrophysics. Currently working in large language models (LLMs)\, focusing on their development and optimization. \n\nFast Summation for Geophysical Fluid Dynamics\nFast Summation refers to a family of techniques for the fast approximation of N-body sums. While traditionally fast summation has been applied to problems coming from astrophysics or electrodynamics\, many problems in geophysical fluid dynamics can be rewritten as the computation of a spherical convolution\, and when these integrals are discretized\, the resulting problem is a N-body problem. In this talk\, I discuss a novel spherical tree code/fast multipole method based on barycentric Lagrange interpolation\, as well as applications to problems coming from geophysical fluid dynamics\, including tidal modeling and the problem of computing Self Attraction and Loading in the ocean model MOM6. \nAnthony Chen\, Applied and Interdisciplinary Mathematics and Scientific Computing\nAnthony Chen is a 4th year in Applied and Interdisciplinary Mathematics working on fast summation for problems in geophysics.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-4-1-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/01/2025-04-01-Baxi-Chen.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250408T113000
DTEND;TZID=America/Detroit:20250408T130000
DTSTAMP:20260619T040404
CREATED:20250114T141754Z
LAST-MODIFIED:20260413T190501Z
UID:10000796-1744111800-1744117200@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nRegister to attend\n  \n  \n\nProbabilistic Rounding Uncertainty Analysis for Floating-Point Statistical Models\nAdvancements in computer hardware now allow low- and mixed-precision arithmetic to improve efficiency\, especially on new architectures. It is thus critical that the rounding uncertainty be rigorously quantified alongside traditional sources of uncertainty including those from observations\, sampling\, and numerical discretization. Traditional deterministic rounding uncertainty analysis (DBEA) assumes that the absolute rounding errors equal the unit roundoff u\, considering the worst-case scenario. This work presents a novel probabilistic rounding uncertainty analysis called VIBEA. By treating rounding errors as i.i.d. random variables and leveraging concentration inequalities\, VIBEA provides high-confidence estimates for rounding uncertainty using higher-order rounding error statistics. The presented framework is valid for all problem sizes n\, unlike DBEA\, which requires nu<1. Further\, it can account for the potential cancellation of rounding errors\, resulting in rounding uncertainty estimates that grow slowly with n. We demonstrate that quantifying rounding uncertainty alongside traditional sources allows for a more efficient allocation of computational resources\, balancing efficiency with accuracy. This study takes a step towards a comprehensive mixed-precision approach to enhance model reliability and optimize resource allocation in predictive modeling. The talk will conclude with a vision for end-to-end\, formally verified numerics for scientific computing. \nSahil Bhola\, Aerospace Engineering and Scientific Computing\nSahil Bhola is a 4th-year Ph.D. candidate in Aerospace Engineering and Scientific Computing at the University of Michigan. He is a MICDE Fellow and a J.N. Tata Scholar\, advised by Prof. Karthik Duraisamy. He holds a master’s degree in Aerospace Engineering from the University of Michigan and a bachelor’s degree in Mechanical Engineering from Thapar University\, India. His research focuses on adaptive mixed-precision methods\, experimental design for potential energy surfaces\, and flow-based generative models for Bayesian inference. \n\nHomogenous Cities? How Conflict and Politics Shape the Urban Topography\nThe relationship between armed conflict\, politics\, and the urban built environment \nMartin Macias Medellin\, Political Science\nMartin Macias Medellin is interested in the dynamics of mass political dissent\, political and criminal violence\, and state-building processes. In his doctoral dissertation he studies how conflict affects the way in which cities are built and how the physical structures of urban areas affect the dynamics of armed conflict. \n\nMinimally Orthogonal Causal Effect Estimation\nCausal Machine Learning \nYiman Ren\, Business Economics\nYiman Ren is a final year PhD student in Business Economics and Scientific Computing at Ross School of Business. Her research focuses on financial economics and causal machine learning.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-4-8-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
ATTACH;FMTTYPE=image/png:https://micde.umich.edu/wp-content/uploads/2025/01/2025-04-08-Bhola-Macias-Medellin-Ren-1.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250415T120000
DTEND;TZID=America/Detroit:20250415T133000
DTSTAMP:20260619T040404
CREATED:20250114T141442Z
LAST-MODIFIED:20260522T152446Z
UID:10000797-1744718400-1744723800@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nRegister to attend\n\nTemporal relationship between acute noise exposure and heart rate variability change\nExcessive noise in daily activities and during sleep is disturbing and causes annoyance and stress over time. Noise\, among numerous environmental pollutants\, also independently contributes to the risk of cardiovascular diseases potentially through stress responses. Heart rate variability (HRV) change\, which reflects the neurohormonal and automatic neural responses to stress\, has been evaluted as an outcome to air pollution (PM 2.5\, ozone)\, smoking\, and other exposures. This analysis explored feasibility of using time series analysis to examine the noise and HRV association in a large longitudinal cohort. Alternative modeling approaches were also explored to accommodate the complex structure of this time series data. \nXin Zhang\, EHS and Scientific Computing\nXin Zhang is a 3rd year PhD candidate in the Department of Environmental Health Sciences at the University of Michigan. Her research focuses on evaluating the effects of environmental noise exposure on auditory and cardiovascular health outcomes using integrated data from personal devices with wearable sensors. \n\nEngineering The Immune Response To Improve Muscle Regeneration\nJesus Castor\, Biomedical Engineering\n 
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-4-15-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
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BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250422T120000
DTEND;TZID=America/Detroit:20250422T130000
DTSTAMP:20260619T040404
CREATED:20250114T140812Z
LAST-MODIFIED:20260522T152527Z
UID:10000798-1745323200-1745326800@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nRegister to attend\n\nApplications of the phase-field method to polycrystalline materials\nPhase-field modeling is a common diffuse interface method for simulating microstructure evolution due to its ability to capture complex morphologies without the need for explicitly tracking phase interfaces. A typical application of the phase-field method is polycrystalline grain growth during annealing\, where grain boundaries migrate toward their centers of curvature. Recent studies have shown abnormally large grains can be grown in shape memory alloys during cyclic annealing due to additional driving forces generated during the growth and dissolution of second-phase precipitates. In this work\, we model grain growth via a phase-field model that considers stored energy generated during the cyclic heat treatments. Applications of the phase-field method to experimentally acquired grain microstructures will also be discussed. \nZach Croft\, Applied Physics\nZach is a PhD student in the Applied Physics program. He works in the field of computational materials science with an emphasis on phase-field modeling of polycrystalline evolution and solidification of alloys under Professor Katsuyo Thornton. \n\nUsing causal inference to estimate counterfactual disparity measures for access to weight management treatments\nType 2 Diabetes (T2D) is a prevalent condition with significant variation in outcomes based on race and ethnicity\, underscoring the need for more improved prevention practices. Because effective weight management is a key component of T2D prevention\, increasing access to evidence-based treatments for those most at-risk for developing T2D is imperative. Yet\, existing population health management approaches do not typically measure disparities in access to treatments or do so in ways that do not account for the increased risk experienced by certain patient populations. This talk will (1) describe how causal inference was used to calculate counterfactual estimates of disparities in referral to weight management treatments among a population of adults with obesity\, (2) compare counterfactual estimates generating from the standard approach vs. a risk-based approach \, and (3) share UM research\, computing\, and other resources that supports this research. \nCassie Turner\, Health Infrastructures and Learning Systems\nCassie has a joint appointment at Michigan Medicine and the Ann Arbor Veteran Affairs Health System\, where she contributes to health research and practice focused on improving metabolic health through leveraging analytics\, novel care models\, and learning health systems approaches.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-4-22-2025/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
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END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=America/Detroit:20250711T120000
DTEND;TZID=America/Detroit:20250711T130000
DTSTAMP:20260619T040404
CREATED:20250709T192007Z
LAST-MODIFIED:20260522T152604Z
UID:10000827-1752235200-1752238800@micde.umich.edu
SUMMARY:Ph.D. in Scientific Computing Student Seminars
DESCRIPTION:The MICDE PhD Student Seminar Series showcases the research of students in the Ph.D. in Scientific Computing. These events are open to the public\, but we request that all who plan to attend register in advance. \nRegister to attend\n\nBridging Bonds and Bands: A Toolkit for Interpreting the Crystal Chemistry of Electronic Structure\nThis talk explores how we can better understand chemical bonding and electronic structure in materials using quantum mechanical calculations. I first show how specific atomic bonds shape the electronic bands of materials like silicon\, using simplified models built from density functional theory (DFT). Then\, I introduce a new method called COGITO\, which creates a clear and flexible atomic picture of the wavefunctions in DFT. COGITO builds a set of atomic orbitals that accurately capture the full electronic structure and reveal where and how electrons are shared between atoms. This makes it possible to see and measure covalent bonds\, estimate bond energies\, and even understand magnetic interactions. I demonstrate how COGITO can explain why some crystal structures are more stable than others and how different DFT functionals change bonding—giving us a powerful new tool for interpreting and designing materials. \nEmily Oliphant\, Materials Science & Engineering and Scientific Computing\nEmily Oliphant is a 5th year PhD student working with Professor Wenhao Sun and Professor Emmanouil Kioupakis. She is working to obtain atom and bonding insight in density functional theory. \n\nAn immersed boundary method formulation for aortic dissection simulation\nAortic dissection is characterized by a disruption of the intima\, leading to delamination of the aortic wall and formation of a true lumen (TL) and a false lumen (FL)\, separated by an intimal flap or septum which moves cyclically due to pressure gradients between TL and FL. Aortic dissection can lead to complications\, including end-organ malperfusion and aortic rupture. The scarcity of clinical hemodynamic data\, such as pressure and flow in the TL and FL\, complicates aortic dissection research\, driving the use of computational simulations to study its flow dynamics and flap motion. Computational simulations can be used to study the aortic dissection dynamics and their relation to pressure gradient across TL and FL. Fluid–structure-interaction (FSI) methods have been used in aortic dissection simulations to investigate the impact of the intimal flap motion on hemodynamic parameters. While the Arbitrary Lagrangian–Eulerian (ALE) approach is widely used for the aortic dissection problems\, it faces challenges: frequent fluid mesh updates increase computational costs\, and mesh quality can degrade when the flap nears the aortic wall. Immersed Boundary Methods (IBM) offer an attractive alternative\, avoiding fluid remeshing and effectively capturing the dynamics of thin structures\, as demonstrated in heart valve simulations among other applications. In this work\, we developed an IBM algorithm within a Finite Element flow solver framework using unstructured grids and computationally efficient rotation-free shell formulation to simulate aortic dissection\, providing a practical approach to study its complex flow and structural behavior in patient-specific cases \nTaeouk Kim\, Biomedical Engineering and Scientific Computing\nTaeouk is a 5th year PhD student in the Biomedical Engineering department. He is working with Dr. Alberto Figueroa at the computational vascular biomechanics lab.
URL:https://micde.umich.edu/event/ph-d-in-scientific-computing-student-seminars-20250711/
LOCATION:4th floor conference room\, Green Ct.\, 3520 Green Ct.\, Ann Arbor\, MI\, 48105\, United States
CATEGORIES:Micde,MICDE PhD Seminar Series,Phd Seminar
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